Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq4705 325 3e-85
seq9459 268 7e-68
>seq4705
Length=1789048
Score = 325 bits (360), Expect = 3e-85
Identities = 236/272 (87%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||
Sbjct 20902 ATGTGTGGCCGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACCAGGAACCTAAGAGT 20843
Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113
|||||||||| ||||| |||||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 20842 GCCAGATACTATGCTGCGTGTAATAGGCTGCGTCCCGCTGAGGAAGGAGACTTTTGGGCA 20783
Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173
||||| ||| ||||||||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct 20782 GAGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTTGCACTGATGAATGGAAAGGTGTAT 20723
Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233
|| | |||| |||||||||| | ||| |||| |||||||||| ||||||||||||
Sbjct 20722 GACAACACACGGTGGGCTGGAGGTCAGTAAGTGGATATCTCCCCAG--ACCCACAGAGTC 20665
Query 5234 CCTTGTCACATCTCATTTGGTTCACGGATGCC 5265
|| | || ||||||||||||| ||||| ||
Sbjct 20664 CCCTCACATCTCTCATTTGGTTCTCGGATTCC 20633
>seq9459
Length=8529303
Score = 268 bits (296), Expect = 7e-68
Identities = 157/163 (96%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8050912 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 8050971
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 8050972 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 8051031
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 8051032 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 8051074
Score = 129 bits (142), Expect = 5e-26
Identities = 80/86 (93%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 5180 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGT 5239
|||||||||||||||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct 8051167 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 8051226
Query 5240 CACATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||||| ||||| ||
Sbjct 8051227 CACATCTCATTTGGTTCTCGGATTCC 8051252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40112476718832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |