Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq5616 118 6e-24 seq4825 78.8 5e-12 >seq5616 Length=3233282 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 1244031 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 1243972 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 1243971 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1243945 >seq4825 Length=12280 Score = 78.8 bits (86), Expect = 5e-12 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 846 CATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGG 905 |||||| ||||||||||| ||||||||| | ||||| ||||||||||||||||| || || Sbjct 12009 CATAGTCCACCATCTTTCCGGTCCTAACACGTGCGCCCGTGCTCCACCTCCCCGCCGTGG 11950 Query 906 TCGGG 910 |||| Sbjct 11949 -CGGG 11946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860412815752