Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq1604199 237 1e-58
seq314707 102 6e-18
>seq1604199
Length=6603
Score = 237 bits (262), Expect = 1e-58
Identities = 151/164 (92%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 4241 TAGAAGGTTTGAAATGGACCGGGAACCTAAGAATGCCAGGTACTGTGCTGAGTGTAATAG 4300
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
||||||||| ||||||||||| ||||||||||||||||| |||||| |||| ||||| ||
Sbjct 4301 GCTGCATCCCGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGCTGGGTCTCAAGAT 4360
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||||||||| |||||||||||||| |||||||| || ||||
Sbjct 4361 CACCTACTTTGCACTGATGGATGGAAAAGTGTATGACATTACAG 4404
Score = 127 bits (140), Expect = 2e-25
Identities = 79/85 (93%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | ||
Sbjct 4497 CAGAGTGGGCTGGATGCCAGCGTGTAGGAATCTCCCCAGATACTCACAGAGTCCCCTATC 4556
Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265
|||||||||||||||| ||||| ||
Sbjct 4557 ACATCTCATTTGGTTCTCGGATCCC 4581
>seq314707
Length=220
Score = 102 bits (112), Expect = 6e-18
Identities = 73/83 (88%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
||||| ||| |||| | |||||||||||||||||||| |||||| |||||||||||||
Sbjct 82 ATGTGTGGCC-ATGCTAAGGAAAGCATAGGAGGTTTGAGGTGGACCAGGAACCTAAGAGT 24
Query 5054 GCCAGATACTGTGCTGAGTGTAA 5076
|||||||||| ||||| ||||||
Sbjct 23 GCCAGATACTATGCTGCGTGTAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38660008651740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |