Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq1604199 242 3e-60
seq314707 109 4e-20
>seq1604199
Length=6603
Score = 242 bits (268), Expect = 3e-60
Identities = 152/164 (93%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 4241 TAGAAGGTTTGAAATGGACCGGGAACCTAAGAATGCCAGGTACTGTGCTGAGTGTAATAG 4300
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||| ||
Sbjct 4301 GCTGCATCCCGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGCTGGGTCTCAAGAT 4360
Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
|||||||||||| |||||||||||||| |||||||| || ||||
Sbjct 4361 CACCTACTTTGCACTGATGGATGGAAAAGTGTATGACATTACAG 4404
Score = 134 bits (148), Expect = 1e-27
Identities = 86/94 (91%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 4497 CAGAGTGGGCTGGATGCCAGCGTGTAGGAATCTCCCCAGATACTCACAGAGTCCCCTATC 4556
Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
||||| |||||||||| ||||| ||||| ||||
Sbjct 4557 ACATCTCATTTGGTTCTCGGATCCCAGGCCCCAG 4590
>seq314707
Length=220
Score = 109 bits (120), Expect = 4e-20
Identities = 83/97 (86%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024
|| ||||||| ||||||| || |||| | |||||||||||||||||||| ||||||
Sbjct 96 CAGTGAATACTTTGATGTGTGGCC-ATGCTAAGGAAAGCATAGGAGGTTTGAGGTGGACC 38
Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAA 5061
||||||||||||||||||||||| ||||| ||||||
Sbjct 37 AGGAACCTAAGAGTGCCAGATACTATGCTGCGTGTAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38749435169320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |