Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq2404380 118 6e-24
seq2135433 91.5 8e-16
seq2131349 91.5 8e-16
seq2114942 91.5 8e-16
seq1574109 84.2 1e-13
seq2288652 80.6 1e-12
seq1657679 78.8 5e-12
seq1728044 77.0 2e-11
>seq2404380
Length=229
Score = 118 bits (130), Expect = 6e-24
Identities = 84/91 (92%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 201 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 142
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 141 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 115
>seq2135433
Length=201
Score = 91.5 bits (100), Expect = 8e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCA 891
||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 55 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCA 1
>seq2131349
Length=213
Score = 91.5 bits (100), Expect = 8e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCA 891
||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 159 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCA 213
>seq2114942
Length=201
Score = 91.5 bits (100), Expect = 8e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCA 891
||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 147 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCA 201
>seq1574109
Length=14762
Score = 84.2 bits (92), Expect = 1e-13
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||||||||||| || ||||||| ||| ||||| |||||||| |||||||||||||
Sbjct 14125 CTGCCCAGGCATAGTTTACTATCTTTCAGGTGCTAACACATGCGCTTGTGCTCCACCTCC 14066
Query 897 C 897
|
Sbjct 14065 C 14065
>seq2288652
Length=3616
Score = 80.6 bits (88), Expect = 1e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACC 893
|||||||||| ||||||||||| |||||||||||||| | |||||| ||||||||||
Sbjct 1775 CTGCCCAGGCGTAGTTCACCATTTTTCGGGTCCTAACACGTGCGCTTGTGCTCCACC 1719
>seq1657679
Length=3863
Score = 78.8 bits (86), Expect = 5e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||| |||||||||||||||||||||||||||| | || ||| |||||||| || |
Sbjct 3237 CTGCCCAGACATAGTTCACCATCTTTCGGGTCCTAACACGTGTGCTTGTGCTCCATCTTC 3296
Query 897 C 897
|
Sbjct 3297 C 3297
>seq1728044
Length=2861
Score = 77.0 bits (84), Expect = 2e-11
Identities = 54/62 (87%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 836 ACTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895
||||| ||| ||||| |||||||||||| ||||||||| | || ||||||| ||||||||
Sbjct 266 ACTGCTCAGTCATAGCTCACCATCTTTCCGGTCCTAACACCTGTGCTCGTGTTCCACCTC 207
Query 896 CC 897
||
Sbjct 206 CC 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2765470039890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |