Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq13899 118 6e-24 seq3636 113 3e-22 seq490 82.4 4e-13 >seq13899 Length=5161 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 265 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 324 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 325 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 351 >seq3636 Length=5015 Score = 113 bits (124), Expect = 3e-22 Identities = 70/74 (95%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 4259 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 4318 Query 897 CCGACGCGGTCGGG 910 ||| ||||| |||| Sbjct 4319 CCGGCGCGG-CGGG 4331 >seq490 Length=517890 Score = 82.4 bits (90), Expect = 4e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||| ||||||||| || ||||||||||||||||||| | || ||||| ||||||||||| Sbjct 104870 CTGCTCAGGCATAGCTCTCCATCTTTCGGGTCCTAACACCTGTGCTCGAGCTCCACCTCC 104811 Query 897 CCGACGCGGTCGGGT 911 | | || || ||||| Sbjct 104810 CTGGCGAGG-CGGGT 104797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2859668096766