Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq2217 246 2e-61 >seq2217 Length=457968 Score = 246 bits (272), Expect = 2e-61 Identities = 153/164 (93%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 295442 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTGATAG 295383 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 || |||||| ||||| ||||| ||||||||||||||||| ||||||| ||||||||| || Sbjct 295382 GCGGCATCCCGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTGGGGCCTCAAGAT 295323 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||||||||| ||||||||||||||||||||||| || |||| Sbjct 295322 CACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATTACAG 295279 Score = 131 bits (144), Expect = 1e-26 Identities = 80/85 (94%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 295182 CAGAGTGGGCTGGATGCCAGCGTGTAGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 295123 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| ||||| || Sbjct 295122 ACATCTCATTTGGTTCTCGGATCCC 295098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40106316939696