Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq2836 250 2e-62 >seq2836 Length=268093 Score = 250 bits (276), Expect = 2e-62 Identities = 153/163 (94%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 79741 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCCGAGTGTAATAAA 79800 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||| Sbjct 79801 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 79860 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| ||||||||||||||||||||||| || |||| Sbjct 79861 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATTACAG 79903 Score = 122 bits (134), Expect = 7e-24 Identities = 78/85 (92%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 |||| |||||||| || |||||||||||||||||||||||||||||||||||||| | || Sbjct 79999 CAGAATGGGCTGGGTGTCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 80058 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| ||||| || Sbjct 80059 ACATCTCATTTGGTTCTCGGATCCC 80083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40037379587352