Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq2836 250 2e-62
>seq2836
Length=268093
Score = 250 bits (276), Expect = 2e-62
Identities = 153/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 79741 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCCGAGTGTAATAAA 79800
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||
Sbjct 79801 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 79860
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||| ||||||||||||||||||||||| || ||||
Sbjct 79861 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATTACAG 79903
Score = 122 bits (134), Expect = 7e-24
Identities = 78/85 (92%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
|||| |||||||| || |||||||||||||||||||||||||||||||||||||| | ||
Sbjct 79999 CAGAATGGGCTGGGTGTCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 80058
Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265
|||||||||||||||| ||||| ||
Sbjct 80059 ACATCTCATTTGGTTCTCGGATCCC 80083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40037379587352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |