Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq118864 100 2e-18
seq7917 100 2e-18
seq7359 98.7 6e-18
seq15417 95.1 7e-17
seq44 95.1 7e-17
seq11819 89.7 3e-15
seq1406 87.8 1e-14
>seq118864
Length=691
Score = 100 bits (110), Expect = 2e-18
Identities = 79/91 (87%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||
Sbjct 203 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACACGTGCGCTTGTGCTCCACCTCC 144
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
|| || ||| || || || ||||||||||
Sbjct 143 CCAGCGTGGT--GGGCG-AG-ACGGGCCGGT 117
>seq7917
Length=101314
Score = 100 bits (110), Expect = 2e-18
Identities = 80/91 (88%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||
Sbjct 23468 CTGCCCAGGCATAGTTCACCATCTCTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 23409
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
| | | ||| |||| || || || |||||||
Sbjct 23408 CTGGCACGG-CGGG-CG-AG-ACCGGCCGGT 23382
>seq7359
Length=110502
Score = 98.7 bits (108), Expect = 6e-18
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 165 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTC 223
>seq15417
Length=25066
Score = 95.1 bits (104), Expect = 7e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||||| ||||||| |||||||||||||||||| | || |||||||||||||||||
Sbjct 1521 CTGCCCAGGCGTAGTTCAACATCTTTCGGGTCCTAACACGTGTGCTCGTGCTCCACCTCC 1580
Query 897 CCGACGC 903
||| |||
Sbjct 1581 CCGGCGC 1587
>seq44
Length=1399699
Score = 95.1 bits (104), Expect = 7e-17
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||||||
Sbjct 399895 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACACGTGCACTCGTGCTCCACCTCC 399836
Query 897 CC 898
||
Sbjct 399835 CC 399834
>seq11819
Length=53682
Score = 89.7 bits (98), Expect = 3e-15
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||| |
Sbjct 38929 CTGCACAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCACTCGTGCTCCACCTAC 38870
Query 897 CC 898
||
Sbjct 38869 CC 38868
>seq1406
Length=405247
Score = 87.8 bits (96), Expect = 1e-14
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||| ||||||||| ||||| || |||| ||||||||
Sbjct 371762 CTGCCCAGGCATAGTTCACCATCTTTCAGGTCCTAACACATGCACTTGTGCACCACCTCC 371703
Query 897 CCGACGCGGTCGG 909
| || ||| ||
Sbjct 371702 TTGGCGTGGTGGG 371690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2855503977972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |