Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq4947 324 1e-84 seq11957 268 7e-68 >seq4947 Length=1988900 Score = 324 bits (358), Expect = 1e-84 Identities = 237/273 (87%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053 ||||| || ||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct 64218 ATGTGTGGCTGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACCAGGAACCTAAGAGT 64277 Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113 |||||||||| ||||| |||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct 64278 GCCAGATACTATGCTGCGTGTGATAGGCTGCGTCCCGCTGAGGAAGGAGACTTTTGGGCA 64337 Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173 ||||| ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 64338 GAGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTAGCACTGATGGATGGAAAGGTGTAT 64397 Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGT-GTGGGAATCTCCCCAGATACCCACAGAGT 5232 || | |||| ||||||||||| |||||||| || | || ||||||| ||||||||||| Sbjct 64398 GACAACACACAGTGGGCTGGAGGCCAGCGTCGTAGATATTTCCCCAG--ACCCACAGAGT 64455 Query 5233 CCCTTGTCACATCTCATTTGGTTCACGGATGCC 5265 ||| | || ||||||||||||| ||||| || Sbjct 64456 CCCCTCACATCTCTCATTTGGTTCTCGGATTCC 64488 >seq11957 Length=507398 Score = 268 bits (296), Expect = 7e-68 Identities = 157/163 (96%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 36531 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 36472 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 36471 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 36412 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 36411 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 36369 Score = 129 bits (142), Expect = 5e-26 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 5180 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGT 5239 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| | | Sbjct 36276 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 36217 Query 5240 CACATCTCATTTGGTTCACGGATGCC 5265 ||||||||||||||||| ||||| || Sbjct 36216 CACATCTCATTTGGTTCTCGGATTCC 36191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40112613472428