Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq4947 343 1e-90 seq11957 271 6e-69 >seq4947 Length=1988900 Score = 343 bits (380), Expect = 1e-90 Identities = 255/296 (86%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| | ||||||| |||||||||||||||||||| |||||| Sbjct 64204 CAGTGAATACTTTGATGTGTGGCTGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 64263 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 ||||||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| Sbjct 64264 AGGAACCTAAGAGTGCCAGATACTATGCTGCGTGTGATAGGCTGCGTCCCGCTGAGGAAG 64323 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||| Sbjct 64324 GAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTAGCACTGATGG 64383 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGT-GTGGGAATCTCCCCA 5203 |||||||||||||||| | |||| ||||||||||| |||||||| || | || |||||| Sbjct 64384 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTCGTAGATATTTCCCCA 64443 Query 5204 GATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 | |||||||||||||| | || || |||||||||| ||||| ||||| ||||| Sbjct 64444 G--ACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAG 64497 >seq11957 Length=507398 Score = 271 bits (300), Expect = 6e-69 Identities = 158/163 (97%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 36531 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 36472 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 36471 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 36412 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 36411 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 36369 Score = 140 bits (154), Expect = 3e-29 Identities = 88/95 (93%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 5165 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTAT 5224 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 36276 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 36217 Query 5225 CACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||| |||||||||| ||||| ||||| ||||| Sbjct 36216 CACATCTCATTTGGTTCTCGGATTCCAGGCACCAG 36182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40205400087304