Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq947 237 1e-58 >seq947 Length=108171978 Score = 237 bits (262), Expect = 1e-58 Identities = 151/164 (92%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 81297899 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAATGCCAGATACTGTGCTGAGTGTAAGAG 81297958 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||||| ||||| ||||| ||||||||||||||||| ||||||| ||||||||| || Sbjct 81297959 GCTACATCCCGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTGGGGCCTCAAGAT 81298018 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||||||||| |||||||||||||||||||||| || |||| Sbjct 81298019 CACCTACTTTGCATTGATGGATGGAAAGGTGTATGACATTACAG 81298062 Score = 122 bits (134), Expect = 7e-24 Identities = 78/85 (92%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | || Sbjct 81298704 CAGAGTGGGCTGGATGCCAGCGTGTAGGAATCTCTCCAGATACCCACAGAGTCCCCTATC 81298763 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 ||||||| |||||||| ||||| || Sbjct 81298764 ACATCTCCTTTGGTTCTCGGATCCC 81298788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40114934672904