Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq106155 354 7e-94 seq119752 349 3e-92 seq100735 349 3e-92 seq121305 336 2e-88 seq137532 293 2e-75 seq219822 271 6e-69 >seq106155 Length=758 Score = 354 bits (392), Expect = 7e-94 Identities = 266/309 (86%), Gaps = 5/309 (2%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| | ||||||| |||||||||||||||||||| |||||| Sbjct 114 CAGTGAATACTTTGATGTGTGGCGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 173 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 |||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct 174 AGGAACCTAAGAGTGTCAGATACTATGCTGCGTGTAATAGGCTGCGTCCCGCTGAGGAAG 233 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||||| Sbjct 234 GAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCTTCAAGATCACCTACTTTGCACTGATGG 293 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAG 5204 |||||||||||||||| | |||| ||||||||||| |||||||||| | |||||||||| Sbjct 294 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTGTAGTTATCTCCCCAG 353 Query 5205 ATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG-CGAC 5263 |||||||||||||| | || || |||||||||| ||||| ||||| ||||| ||| Sbjct 354 --ACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAGAGGAC 411 Query 5264 --CAGAGAG 5270 ||||||| Sbjct 412 GGCAGAGAG 420 >seq119752 Length=734 Score = 349 bits (386), Expect = 3e-92 Identities = 255/295 (86%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| | ||||||| |||||||||||||||||||| |||||| Sbjct 403 CAGTGAATACTTTGATGTGTGGCGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 462 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 |||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct 463 AGGAACCTAAGAGTGTCAGATACTATGCTGCGTGTAATAGGCTGCGTCCCGCTGAGGAAG 522 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||||||||||| |||||||| |||| |||||||||||||| || |||| Sbjct 523 GAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCTTCAAGATCACCTACTTTGCCCTAATGG 582 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAG 5204 |||||||||||||||| | |||| ||||||||||| |||||||||| | |||||||||| Sbjct 583 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTGTAGTTATCTCCCCAG 642 Query 5205 ATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||||||||||| | || || |||||||||| ||||| ||||| ||||| Sbjct 643 --ACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAG 695 >seq100735 Length=956 Score = 349 bits (386), Expect = 3e-92 Identities = 255/295 (86%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| | ||||||| |||||||||||||||||||| |||||| Sbjct 308 CAGTGAATACTTTGATGTGTGGCGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 367 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 |||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct 368 AGGAACCTAAGAGTGTCAGATACTATGCTGCGTGTAATAGGCTGCGTCCCGCTGAGGAAG 427 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||||||||||| |||||||| |||| |||||||||||||| || |||| Sbjct 428 GAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCTTCAAGATCACCTACTTTGCCCTAATGG 487 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAG 5204 |||||||||||||||| | |||| ||||||||||| |||||||||| | |||||||||| Sbjct 488 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTGTAGTTATCTCCCCAG 547 Query 5205 ATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||||||||||| | || || |||||||||| ||||| ||||| ||||| Sbjct 548 --ACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAG 600 >seq121305 Length=937 Score = 336 bits (372), Expect = 2e-88 Identities = 262/309 (85%), Gaps = 5/309 (2%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| ||||||| |||||||||||||||||||| |||||| Sbjct 313 CAGTGAATACTTTGATGTGTGGTGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 372 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 |||||||||||||| |||||||| ||| | |||||||||||||| ||| |||||||||| Sbjct 373 AGGAACCTAAGAGTGTCAGATACTATGCGGCGTGTAATAGGCTGCGTCCCGCTGAGGAAG 432 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | |||||| |||||||||||||| |||||||| |||| |||||||||||||| ||||||| Sbjct 433 GAGACTTTGGGGCAGAGTCAAGCTTGTTGGGCTTCAAGATCACCTACTTTGCCCTGATGG 492 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAG 5204 |||||||||||||||| | |||| ||||||||||| |||||| ||| | |||||||||| Sbjct 493 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCATGTAGTTATCTCCCCAG 552 Query 5205 ATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG-CGAC 5263 |||||||||||||| | || || |||||||||| ||||| ||||| ||||| ||| Sbjct 553 --ACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAGAGGAC 610 Query 5264 --CAGAGAG 5270 ||||||| Sbjct 611 GGCAGAGAG 619 >seq137532 Length=625 Score = 293 bits (324), Expect = 2e-75 Identities = 220/255 (86%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078 |||||| |||||||||||||| |||||||| ||| | |||||||||||||| ||| |||| Sbjct 622 TGGACCAGGAACCTAAGAGTGTCAGATACTATGCGGCGTGTAATAGGCTGCGTCCCGCTG 563 Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138 ||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||| | Sbjct 562 AGGAAGGAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCTTCAAGATCACCTACTTTGCCC 503 Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198 |||||||||||||||||||||| | |||| ||||||||||| |||||||||| | |||| Sbjct 502 TGATGGATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTGTAGTTATCT 443 Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258 |||| | |||||||||||||| | || || |||||||||| ||||| ||||| |||| Sbjct 442 CCCC-CAGACCCACAGAGTCCCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCA 384 Query 5259 G-CGAC--CAGAGAG 5270 | ||| ||||||| Sbjct 383 GAGGACGGCAGAGAG 369 >seq219822 Length=1702 Score = 271 bits (300), Expect = 6e-69 Identities = 158/163 (97%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 768 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 709 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 708 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 649 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 648 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 606 Score = 140 bits (154), Expect = 3e-29 Identities = 88/95 (93%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 5165 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTAT 5224 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 513 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 454 Query 5225 CACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||| |||||||||| ||||| ||||| ||||| Sbjct 453 CACATCTCATTTGGTTCTCGGATTCCAGGCACCAG 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40066643701576