Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nomascus_20leucogenys_20[refseq_20GCF_5F000146795.2_202012-12-08] 17,484 sequences; 2,962,060,179 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq825 277 1e-70 >seq825 Length=123690457 Score = 277 bits (306), Expect = 1e-70 Identities = 159/163 (98%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56987008 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 56987067 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 56987068 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 56987127 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 56987128 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 56987170 Score = 132 bits (146), Expect = 4e-27 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226 |||||||||||| ||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct 56987261 AGAGTGGGCTGGCTGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 56987320 Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||| |||||||||| ||||| ||||| ||||| Sbjct 56987321 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 56987353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40203290658016