Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq10 320 1e-83 seq11 268 7e-68 >seq10 Length=91330067 Score = 320 bits (354), Expect = 1e-83 Identities = 236/273 (86%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053 ||||| || ||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct 60553452 ATGTGTGGCGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACCAGGAACCTAAGAGT 60553511 Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113 |||||||||| ||||| |||| ||||||||| ||| ||||||||||| |||||||||||| Sbjct 60553512 GCCAGATACTATGCTGCGTGTGATAGGCTGCGTCCCGCTGAGGAAGGAGACTTTTGGGCA 60553571 Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173 ||||| ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 60553572 GAGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTAGCACTGATGGATGGAAAGGTGTAT 60553631 Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGT-GTGGGAATCTCCCCAGATACCCACAGAGT 5232 || | |||| ||||||||||| |||||||| | | |||||||||| ||||||||||| Sbjct 60553632 GACAACACACAGTGGGCTGGAGGCCAGCGTCCTAGATATCTCCCCAG--ACCCACAGAGT 60553689 Query 5233 CCCTTGTCACATCTCATTTGGTTCACGGATGCC 5265 | | | || ||||||||||||| ||||| || Sbjct 60553690 CTCCTCACATCTCTCATTTGGTTCTCGGATTCC 60553722 >seq11 Length=132960392 Score = 268 bits (296), Expect = 7e-68 Identities = 157/163 (96%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51719761 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 51719702 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 51719701 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 51719642 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 51719641 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 51719599 Score = 129 bits (142), Expect = 5e-26 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 5180 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGT 5239 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| | | Sbjct 51719506 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 51719447 Query 5240 CACATCTCATTTGGTTCACGGATGCC 5265 ||||||||||||||||| ||||| || Sbjct 51719446 CACATCTCATTTGGTTCTCGGATTCC 51719421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40089860472312