Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq10 338 5e-89 seq11 271 6e-69 >seq10 Length=91330067 Score = 338 bits (374), Expect = 5e-89 Identities = 254/296 (86%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| | ||||||| |||||||||||||||||||| |||||| Sbjct 60553438 CAGTGAATACTCTGATGTGTGGCGGATGCCAAGGAAAGCATAGGAGGTTTGAGGTGGACC 60553497 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 ||||||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| Sbjct 60553498 AGGAACCTAAGAGTGCCAGATACTATGCTGCGTGTGATAGGCTGCGTCCCGCTGAGGAAG 60553557 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||| Sbjct 60553558 GAGACTTTTGGGCAGAGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTAGCACTGATGG 60553617 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGT-GTGGGAATCTCCCCA 5203 |||||||||||||||| | |||| ||||||||||| |||||||| | | ||||||||| Sbjct 60553618 ATGGAAAGGTGTATGACAACACACAGTGGGCTGGAGGCCAGCGTCCTAGATATCTCCCCA 60553677 Query 5204 GATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 | |||||||||||| | | || || |||||||||| ||||| ||||| ||||| Sbjct 60553678 G--ACCCACAGAGTCTCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAG 60553731 >seq11 Length=132960392 Score = 271 bits (300), Expect = 6e-69 Identities = 158/163 (97%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51719761 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 51719702 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 51719701 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 51719642 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 51719641 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 51719599 Score = 140 bits (154), Expect = 3e-29 Identities = 88/95 (93%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 5165 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTAT 5224 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 51719506 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 51719447 Query 5225 CACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||| |||||||||| ||||| ||||| ||||| Sbjct 51719446 CACATCTCATTTGGTTCTCGGATTCCAGGCACCAG 51719412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40182594456016