Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08]
61,535 sequences; 3,441,244,233 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq37270 277 1e-70
>seq37270
Length=136387465
Score = 277 bits (306), Expect = 1e-70
Identities = 159/163 (98%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 55574458 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 55574399
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 55574398 CTGCATCCCGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 55574339
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||| |||||||||||||||||||||||||||||||
Sbjct 55574338 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGATATCACAG 55574296
Score = 138 bits (152), Expect = 9e-29
Identities = 99/113 (88%), Gaps = 1/113 (1%)
Strand=Plus/Minus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
|||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct 55574201 AGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 55574142
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279
|||| |||||||||| ||||| ||||| ||||| | | || ||||| | |||
Sbjct 55574141 CATCTCATTTGGTTCTCGGATTCCAGGCACCAGAGGGC-GACAGAGGTAGGTG 55574090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40183363042840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |