Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq25851 114 7e-23 seq8175 93.3 2e-16 seq43713 75.2 6e-11 >seq25851 Length=153482349 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 100564387 CTGCCCAGGCACAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 100564328 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 100564327 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 100564301 Score = 75.2 bits (82), Expect = 6e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897 |||||||||||||||||||||||||| ||||||| || |||| ||||||||||||| Sbjct 70569863 TGCCCAGGCATAGTTCACCATCTTTCATTTCCTAACATCTGTGCTCATGCTCCACCTCCC 70569922 Query 898 C 898 | Sbjct 70569923 C 70569923 >seq8175 Length=11768 Score = 93.3 bits (102), Expect = 2e-16 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct 5804 CTGCCCAGGCATAGTTCACCATCTTTCTGGTCCTAACACGTGCTCTCGTGCTCCACCTCC 5863 Query 897 CCGACGCGG 905 | | || || Sbjct 5864 CTGGCGTGG 5872 Score = 93.3 bits (102), Expect = 2e-16 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct 6587 CTGCCCAGGCATAGTTCACCATCTTTCTGGTCCTAACACGTGCTCTCGTGCTCCACCTCC 6646 Query 897 CCGACGCGG 905 | | || || Sbjct 6647 CTGGCGTGG 6655 >seq43713 Length=77800216 Score = 75.2 bits (82), Expect = 6e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895 ||| ||||||| ||||||||||||||| ||||||||| | ||| || |||||||||||| Sbjct 34405761 CTGACCAGGCACAGTTCACCATCTTTCAGGTCCTAACACGTGCCCTGGTGCTCCACCTC 34405703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2858984594430