Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq1225 255 5e-64 >seq1225 Length=8632973 Score = 255 bits (282), Expect = 5e-64 Identities = 155/164 (95%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 6475383 TAGGAGGTTTGAAATGGACCGAGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 6475324 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 6475323 GCTACATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 6475264 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 |||||||||||| |||||||||||||||||||||| || |||| Sbjct 6475263 CACCTACTTTGCATTGATGGATGGAAAGGTGTATGACATTACAG 6475220 Score = 138 bits (152), Expect = 9e-29 Identities = 87/94 (93%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 6475125 CAGAGTGGGCTGGATGCCAGCGTGTAGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 6475066 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 | ||| |||||||||| ||||| ||||| ||||| Sbjct 6475065 ATATCTCATTTGGTTCTCGGATCCCAGGCACCAG 6475032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40201003897336