Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_003877.1
Length=8747
Score E
Sequences producing significant alignments: (Bits) Value
seq43849 165 5e-37
>seq43849
Length=2497
Score = 165 bits (182), Expect = 5e-37
Identities = 223/308 (72%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 5636 CTAAAAGCTAAGGTGGAAAGGACAGAAACCCCAATGTTTTGTGGATGGAGACTAACTCCA 5695
|||||||| |||||| ||||| ||||| || ||||| ||||| |||| | | |
Sbjct 2487 CTAAAAGCAAAGGTGATTAGGACTGAAACACCTATGTTCTGTGGTTGGAACTTGAGCAGA 2428
Query 5696 TATGGGATTGTGAAGGAGCCTGAATTAGTCTATAATCGCTTTCAAGTGGCCATTGAAGAG 5755
| || ||||| || ||||| ||| | ||||| ||| | ||| || |||| |||
Sbjct 2427 CACGGAATTGTCAAAGAGCCGGAACTTGTCTACAATAGATTTATGGTTGCCAAAGAAAGA 2368
Query 5756 GGAAAGGTCTTGGAGTGTCTGGAAAATTATGCAATCGAGGTTTCTTATGCCTACAGTTTA 5815
||||| || |||| || || || |||||||| || || ||||||||||| |||| |||
Sbjct 2367 GGAAACGTGATGGAATGCCTTGAGAATTATGCCATAGAAGTTTCTTATGCTTACATGTTA 2308
Query 5816 AGTGAGAGGCTGTATGAAGTTTTGAAAAGTGAAAGGCAAGTTCAGTATCATCAAGCTGTG 5875
|||||| ||| ||||| ||| ||||||| ||| ||| || | |||||||| || |||
Sbjct 2307 GGTGAGAAGCTCTATGAGGTTCTGAAAAGAGAAGAGCAGATTGAATATCATCAGGCAGTG 2248
Query 5876 GTTAGATTTATAGTCACGCACATTGACA-AACTCAAAACAAAAGTGAGGGACCTTTTCTT 5934
||| | || || |||| | | || || | || || || ||||| | |||||| || |
Sbjct 2247 GTTCGTTTCATTGTCAAG-AGGCTGTCACATCTGAAGACGAAAGTAAAGGACCTCTTTTC 2189
Query 5935 AGAACAAT 5942
||| ||||
Sbjct 2188 AGATCAAT 2181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27832703978848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |