Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_005092.1 Length=9394 Score E Sequences producing significant alignments: (Bits) Value seq42544 93.3 3e-15 >seq42544 Length=1694 Score = 93.3 bits (102), Expect = 3e-15 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 8627 TGCAGAATGCTTATCATGTAGCGGGTGATCTCGTATACCAAGTGCTCTGTGGTTCTCCAT 8686 ||||||||||| ||| | || || || || ||| |||||| |||||||| ||||| Sbjct 1332 TGCAGAATGCTACACATATCGCAGGGGACCTAATATTCCAAGTCCTCTGTGGCTCTCCTA 1391 Query 8687 CAGGTGCTTTCGCTACTGACAGAATTAATAGTTTAGCAAATCTTTGCTACCATTGCTTGT 8746 || || || ||||| || ||||| |||||| | || ||| |||| ||||||||||| | Sbjct 1392 GTGGGGCCTTTGCTACCGATAGAATCAATAGTCTGGCTAATATTTGTTACCATTGCTTAT 1451 Query 8747 GCCACTTACGAAAGTA 8762 | | ||||| || || Sbjct 1452 GTTATTTACGCAAATA 1467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29899947633344