Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_018093.1
Length=10798
Score E
Sequences producing significant alignments: (Bits) Value
seq34980 181 7e-42
>seq34980
Length=661
Score = 181 bits (200), Expect = 7e-42
Identities = 159/198 (80%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 9342 TGAATTGGCGCATCAAGGAAAAGCACCTTACATAGCTGAGTCAGCTCTGAAGACACTATA 9401
||| || ||||||||||||||||||||||| |||||||| |||||| |||| || || ||
Sbjct 1 TGAGTTAGCGCATCAAGGAAAAGCACCTTATATAGCTGAATCAGCTTTGAAAACTCTCTA 60
Query 9402 TACAAATATAGCTCCAACAAACATGGAACTATCAGAGTATGCACGAGTTTTATCACAAAT 9461
|||||| ||| |||||||||| | ||| | |||||||| || | ||| | | || ||
Sbjct 61 TACAAACATAACTCCAACAAATACGGAGTTGTCAGAGTACGCGAGGGTTCTTGCGCAGAT 120
Query 9462 GTATGAAGACTCTCTGACAAATTTTGAGGATAACAACGTGCATCATCAGTCTGCTGAAGA 9521
||| ||| | ||| || ||| ||| ||| ||| |||||||| |||||| |||||||
Sbjct 121 GTACGAAAATTCTTTGGAGAATCATGAAGATTACAGTGTGCATCACCAGTCTACTGAAGA 180
Query 9522 GATATACGATGCAGGAAA 9539
||||||||||||||||||
Sbjct 181 GATATACGATGCAGGAAA 198
Score = 107 bits (118), Expect = 1e-19
Identities = 77/89 (87%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 9601 GGGGCACCAAGAACAGGTGACCTGCCTCCAGCAGTGCAGACAGGACCATTACCACCAGGT 9660
|| |||||||||||| |||| ||||||| |||||||| ||||||||| ||||||||||
Sbjct 572 GGAGCACCAAGAACAAGTGATTTGCCTCCTGCAGTGCAAACAGGACCACTACCACCAGGA 631
Query 9661 GCAGCCTCAAAACCACCTATCATTGAGGA 9689
||||| ||||| ||||| || ||||||||
Sbjct 632 GCAGCATCAAAGCCACCAATAATTGAGGA 660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34385898314816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |