Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_018093.1 Length=10798 Score E Sequences producing significant alignments: (Bits) Value seq34980 181 7e-42 >seq34980 Length=661 Score = 181 bits (200), Expect = 7e-42 Identities = 159/198 (80%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 9342 TGAATTGGCGCATCAAGGAAAAGCACCTTACATAGCTGAGTCAGCTCTGAAGACACTATA 9401 ||| || ||||||||||||||||||||||| |||||||| |||||| |||| || || || Sbjct 1 TGAGTTAGCGCATCAAGGAAAAGCACCTTATATAGCTGAATCAGCTTTGAAAACTCTCTA 60 Query 9402 TACAAATATAGCTCCAACAAACATGGAACTATCAGAGTATGCACGAGTTTTATCACAAAT 9461 |||||| ||| |||||||||| | ||| | |||||||| || | ||| | | || || Sbjct 61 TACAAACATAACTCCAACAAATACGGAGTTGTCAGAGTACGCGAGGGTTCTTGCGCAGAT 120 Query 9462 GTATGAAGACTCTCTGACAAATTTTGAGGATAACAACGTGCATCATCAGTCTGCTGAAGA 9521 ||| ||| | ||| || ||| ||| ||| ||| |||||||| |||||| ||||||| Sbjct 121 GTACGAAAATTCTTTGGAGAATCATGAAGATTACAGTGTGCATCACCAGTCTACTGAAGA 180 Query 9522 GATATACGATGCAGGAAA 9539 |||||||||||||||||| Sbjct 181 GATATACGATGCAGGAAA 198 Score = 107 bits (118), Expect = 1e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 9601 GGGGCACCAAGAACAGGTGACCTGCCTCCAGCAGTGCAGACAGGACCATTACCACCAGGT 9660 || |||||||||||| |||| ||||||| |||||||| ||||||||| |||||||||| Sbjct 572 GGAGCACCAAGAACAAGTGATTTGCCTCCTGCAGTGCAAACAGGACCACTACCACCAGGA 631 Query 9661 GCAGCCTCAAAACCACCTATCATTGAGGA 9689 ||||| ||||| ||||| || |||||||| Sbjct 632 GCAGCATCAAAGCCACCAATAATTGAGGA 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34385898314816