Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq97427 118 6e-24
seq72709 78.8 5e-12
seq8711 77.0 2e-11
seq27082 75.2 6e-11
>seq97427
Length=343
Score = 118 bits (130), Expect = 6e-24
Identities = 84/91 (92%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 110 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 169
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 170 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 196
>seq72709
Length=247
Score = 78.8 bits (86), Expect = 5e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCG 899
|||||||||||||||||||||||||||| |||| | ||||| |||||| ||||||||
Sbjct 115 CAGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTACGCTCTTGCTCCGCCTCCCCG 172
>seq8711
Length=640207
Score = 77.0 bits (84), Expect = 2e-11
Identities = 54/62 (87%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||| ||||| ||||||||| || |||| |||||||||| |
Sbjct 420509 CTGCCCAGGCATAGTTCACCACCTTTCAGGTCCTAACATTTGTGCTCATGCTCCACCTTC 420450
Query 897 CC 898
||
Sbjct 420449 CC 420448
>seq27082
Length=3259343
Score = 75.2 bits (82), Expect = 6e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897
|||||||||||||||||||||||| ||||||| |||| |||| |||||||||||||
Sbjct 3214757 TGCCCAGGCATAGTTCACCATCTTCTTTTTCCTAACACATGTGCTCATGCTCCACCTCCC 3214816
Query 898 C 898
|
Sbjct 3214817 C 3214817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2856802124976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |