Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_023295.1 Length=7315 Score E Sequences producing significant alignments: (Bits) Value seq43849 206 1e-49 >seq43849 Length=2497 Score = 206 bits (228), Expect = 1e-49 Identities = 234/314 (75%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 4778 AAAATATCACTTAAAGCTAAGACGCAAATCACTGAAGTGCCAATGTTTTGCGGATGGAGG 4837 |||||||| || ||||| ||| | | |||||| || ||||| || || |||| Sbjct 2496 AAAATATCTCTAAAAGCAAAGGTGATTAGGACTGAAACACCTATGTTCTGTGGTTGGAAC 2437 Query 4838 TTATCTAGATTCGGAATTGTTAAAGAACCTGAACTGGTCTACAATAGATTTATGGTGGCC 4897 || ||| ||||||||| ||||| || ||||| |||||||||||||||||||| ||| Sbjct 2436 TTGAGCAGACACGGAATTGTCAAAGAGCCGGAACTTGTCTACAATAGATTTATGGTTGCC 2377 Query 4898 TTAGAAAGGGGGAACGTCAAAGACTGTCTAGAGAATTATGCCATTGAAGTTTCCTACGCC 4957 |||||| || ||||| | || || || |||||||||||||| |||||||| || || Sbjct 2376 AAAGAAAGAGGAAACGTGATGGAATGCCTTGAGAATTATGCCATAGAAGTTTCTTATGCT 2317 Query 4958 TACAGTTTAGGTGAGAGGCTCTTTGATATTTTGAAGAGAGAGGAGCAGCTTGAGTATCAC 5017 |||| |||||||||| ||||| ||| || |||| ||||| |||||| |||| ||||| Sbjct 2316 TACATGTTAGGTGAGAAGCTCTATGAGGTTCTGAAAAGAGAAGAGCAGATTGAATATCAT 2257 Query 5018 CAAGCAGTCGTAAGGTTCATTGTGAAGCATCTGGGCAACCTGCGGACAAAAGTTAAAGAT 5077 || ||||| || | |||||||| ||| ||| | ||| ||| ||||| || || Sbjct 2256 CAGGCAGTGGTTCGTTTCATTGTCAAGAGGCTGTCACATCTGAAGACGAAAGTAAAGGAC 2197 Query 5078 CTTTTTGCGGAACA 5091 || ||| | || || Sbjct 2196 CTCTTTTCAGATCA 2183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23257289893472