Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_025388.1
Length=9409
Score E
Sequences producing significant alignments: (Bits) Value
seq53206 313 1e-81
seq45301 251 4e-63
>seq53206
Length=211
Score = 313 bits (346), Expect = 1e-81
Identities = 196/211 (93%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 8889 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGAGAGTGACCCCTCTTTTCTCGCT 8948
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 1 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTCTTTTCTCGCT 60
Query 8949 TATGGGGGCATTGTTAGGCGGGCGTGTGACCCATTGAAAGATGGGTTCCCTGCGTTAAGG 9008
||| |||| ||||||| ||||||||| |||||||||| ||||||||||||| ||||||||
Sbjct 61 TATAGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 120
Query 9009 GTAGTTGTGGTTTAGAATAAGCCTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 9068
||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct 121 GTAGTTGAAGTTTAGAACAAACTTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 180
Query 9069 AGTTCTGGGTAAGAAATAACCCTGTGCTTGG 9099
|||||||||||||||| ||||||||||||||
Sbjct 181 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 211
>seq45301
Length=200
Score = 251 bits (278), Expect = 4e-63
Identities = 172/191 (90%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 8666 TAGTATGTGTTTTAGTAAATATTAATAGTTTCCACTTCCTTAGGTCCCAGGTCTAGAACC 8725
|||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 192 TAGTGTGTGTCTTAGTAAATATTAGTAGTTTCCACTTCCTTAGGTTCCAGGTCTAGAACC 133
Query 8726 CAGGAGAGACCCAAAAGAGTCCTGGTGAGCGTTTAG-CTATAAGAACCTCTGCACTGCAT 8784
||||||||||| |||||||||||||| |||||||| | | ||||||||||||||||||
Sbjct 132 CAGGAGAGACCTAAAAGAGTCCTGGTTGGCGTTTAGCCGTTCAGAACCTCTGCACTGCAT 73
Query 8785 AGGCCACACCAACGCTAATCATTGTGTGCCTTATGTGGGCAAGTTAACCAGGTTGTGGCG 8844
|||||||||||| | |||||| ||||||||||||| |||||||||||| |||||||||
Sbjct 72 AGGCCACACCAAAGTCAATCATCGTGTGCCTTATGTTGGCAAGTTAACCGAGTTGTGGCG 13
Query 8845 GCAACCTGGAA 8855
|||||| ||||
Sbjct 12 GCAACC-GGAA 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 29947874456864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |