Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_025388.1 Length=9409 Score E Sequences producing significant alignments: (Bits) Value seq53206 313 1e-81 seq45301 251 4e-63 >seq53206 Length=211 Score = 313 bits (346), Expect = 1e-81 Identities = 196/211 (93%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 8889 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGAGAGTGACCCCTCTTTTCTCGCT 8948 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 1 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTCTTTTCTCGCT 60 Query 8949 TATGGGGGCATTGTTAGGCGGGCGTGTGACCCATTGAAAGATGGGTTCCCTGCGTTAAGG 9008 ||| |||| ||||||| ||||||||| |||||||||| ||||||||||||| |||||||| Sbjct 61 TATAGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 120 Query 9009 GTAGTTGTGGTTTAGAATAAGCCTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 9068 ||||||| |||||||| || | ||||||||||||||||||||||||||||||||||||| Sbjct 121 GTAGTTGAAGTTTAGAACAAACTTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 180 Query 9069 AGTTCTGGGTAAGAAATAACCCTGTGCTTGG 9099 |||||||||||||||| |||||||||||||| Sbjct 181 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 211 >seq45301 Length=200 Score = 251 bits (278), Expect = 4e-63 Identities = 172/191 (90%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 8666 TAGTATGTGTTTTAGTAAATATTAATAGTTTCCACTTCCTTAGGTCCCAGGTCTAGAACC 8725 |||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 192 TAGTGTGTGTCTTAGTAAATATTAGTAGTTTCCACTTCCTTAGGTTCCAGGTCTAGAACC 133 Query 8726 CAGGAGAGACCCAAAAGAGTCCTGGTGAGCGTTTAG-CTATAAGAACCTCTGCACTGCAT 8784 ||||||||||| |||||||||||||| |||||||| | | |||||||||||||||||| Sbjct 132 CAGGAGAGACCTAAAAGAGTCCTGGTTGGCGTTTAGCCGTTCAGAACCTCTGCACTGCAT 73 Query 8785 AGGCCACACCAACGCTAATCATTGTGTGCCTTATGTGGGCAAGTTAACCAGGTTGTGGCG 8844 |||||||||||| | |||||| ||||||||||||| |||||||||||| ||||||||| Sbjct 72 AGGCCACACCAAAGTCAATCATCGTGTGCCTTATGTTGGCAAGTTAACCGAGTTGTGGCG 13 Query 8845 GCAACCTGGAA 8855 |||||| |||| Sbjct 12 GCAACC-GGAA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29947874456864