Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_028868.1 Length=9362 Score E Sequences producing significant alignments: (Bits) Value seq53206 358 4e-95 seq45301 269 2e-68 >seq53206 Length=211 Score = 358 bits (396), Expect = 4e-95 Identities = 206/211 (98%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 8842 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTTTTCTCTCGCT 8901 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTCTTTTCTCGCT 60 Query 8902 TATGGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 8961 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TATAGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 120 Query 8962 GTAGTTGAAGTTTAGAATAAACTTCCATGGTTCCGACCTACCATGATTAAAGTGATCGGT 9021 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 121 GTAGTTGAAGTTTAGAACAAACTTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 180 Query 9022 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 9052 ||||||||||||||||||||||||||||||| Sbjct 181 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 211 >seq45301 Length=200 Score = 269 bits (298), Expect = 2e-68 Identities = 178/197 (90%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 8609 TAGAGCTATAGTATGTGTGTTAGTAAATATTAGTAGTTTCCACTTCCTAAGGTTCCAGGT 8668 ||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 200 TAGAGTCTTAGTGTGTGTCTTAGTAAATATTAGTAGTTTCCACTTCCTTAGGTTCCAGGT 141 Query 8669 CTCGAACCCAGGAAAGACCTTAAAGAGTCCTGGTTGGCGTTTAGCTGTATAAAACCTCTG 8728 || |||||||||| |||||| |||||||||||||||||||||||| || | |||||||| Sbjct 140 CTAGAACCCAGGAGAGACCTAAAAGAGTCCTGGTTGGCGTTTAGCCGTTCAGAACCTCTG 81 Query 8729 CACCGCATAGGCCACACCAAAGTTCATCATTGTGTGCCTTATGCGGGCAAGTTAACCGAG 8788 ||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| Sbjct 80 CACTGCATAGGCCACACCAAAGTCAATCATCGTGTGCCTTATGTTGGCAAGTTAACCGAG 21 Query 8789 TTGTGGCGGCAACCGGA 8805 ||||||||||||||||| Sbjct 20 TTGTGGCGGCAACCGGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29797703743168