Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_028868.1
Length=9362
Score E
Sequences producing significant alignments: (Bits) Value
seq53206 358 4e-95
seq45301 269 2e-68
>seq53206
Length=211
Score = 358 bits (396), Expect = 4e-95
Identities = 206/211 (98%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 8842 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTTTTCTCTCGCT 8901
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTCTTTTCTCGCT 60
Query 8902 TATGGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 8961
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TATAGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 120
Query 8962 GTAGTTGAAGTTTAGAATAAACTTCCATGGTTCCGACCTACCATGATTAAAGTGATCGGT 9021
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 121 GTAGTTGAAGTTTAGAACAAACTTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 180
Query 9022 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 9052
|||||||||||||||||||||||||||||||
Sbjct 181 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 211
>seq45301
Length=200
Score = 269 bits (298), Expect = 2e-68
Identities = 178/197 (90%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 8609 TAGAGCTATAGTATGTGTGTTAGTAAATATTAGTAGTTTCCACTTCCTAAGGTTCCAGGT 8668
||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 200 TAGAGTCTTAGTGTGTGTCTTAGTAAATATTAGTAGTTTCCACTTCCTTAGGTTCCAGGT 141
Query 8669 CTCGAACCCAGGAAAGACCTTAAAGAGTCCTGGTTGGCGTTTAGCTGTATAAAACCTCTG 8728
|| |||||||||| |||||| |||||||||||||||||||||||| || | ||||||||
Sbjct 140 CTAGAACCCAGGAGAGACCTAAAAGAGTCCTGGTTGGCGTTTAGCCGTTCAGAACCTCTG 81
Query 8729 CACCGCATAGGCCACACCAAAGTTCATCATTGTGTGCCTTATGCGGGCAAGTTAACCGAG 8788
||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct 80 CACTGCATAGGCCACACCAAAGTCAATCATCGTGTGCCTTATGTTGGCAAGTTAACCGAG 21
Query 8789 TTGTGGCGGCAACCGGA 8805
|||||||||||||||||
Sbjct 20 TTGTGGCGGCAACCGGA 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 29797703743168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |