Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_028975.1
Length=9654
Score E
Sequences producing significant alignments: (Bits) Value
seq53206 300 1e-77
seq45301 255 4e-64
>seq53206
Length=211
Score = 300 bits (332), Expect = 1e-77
Identities = 193/211 (91%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 9135 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGAGAGTAACCCCTCTTCTCTCGCT 9194
||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||
Sbjct 1 CCTGTGGTTGGATTTCCACCGTTATCTCGTCGTTAAGGGAGCAACCCCTCTTTTCTCGCT 60
Query 9195 TATGGGGGCATCGTTAAGCGGGCGTGTGACCTATTGAAAGGTGGGTTCCCTACGTTAAGG 9254
||| |||| || |||||||||||||| |||| ||||| || |||||||||||||||||||
Sbjct 61 TATAGGGGTATTGTTAAGCGGGCGTGCGACCCATTGAGAGATGGGTTCCCTACGTTAAGG 120
Query 9255 GTAGTTGTGGTTTAGAATAAACCTCCATGGTTCCGACCTGCCATGTTTCAAGCGATCGGC 9314
||||||| |||||||| |||| |||||||||||||||||||||| || ||| ||||||
Sbjct 121 GTAGTTGAAGTTTAGAACAAACTTCCATGGTTCCGACCTGCCATGATTAAAGTGATCGGT 180
Query 9315 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 9345
|||||||||||||||||||||||||||||||
Sbjct 181 AGTTCTGGGTAAGAAACAACCCTGTGCTTGG 211
>seq45301
Length=200
Score = 255 bits (282), Expect = 4e-64
Identities = 180/202 (89%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 8901 TAGAGCCATTAG-GTGTGTTTTAGTAAATATTAGTAGTTTGCACTTCCCTGAGTTCCAGG 8959
||||| | |||| |||||| |||||||||||||||||||| ||||||| | ||||||||
Sbjct 200 TAGAGTC-TTAGTGTGTGTCTTAGTAAATATTAGTAGTTTCCACTTCCTTAGGTTCCAGG 142
Query 8960 TCTAGAACCCAGGAAAGACCCAAAAGAGTCCTGGTGGGCGTTTAGCCATTTTAAAAACCT 9019
|||||||||||||| ||||| |||||||||||||| ||||||||||| || | |||||
Sbjct 141 TCTAGAACCCAGGAGAGACCTAAAAGAGTCCTGGTTGGCGTTTAGCC--GTTCAGAACCT 84
Query 9020 CTGCACCTCGTAGGCCACACCAACGTCAATCATCGTGTGCCTTATGTGGGCAAGTTAACC 9079
|||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 83 CTGCACTGCATAGGCCACACCAAAGTCAATCATCGTGTGCCTTATGTTGGCAAGTTAACC 24
Query 9080 GTGTTGTGGCGGCAACCGGAAA 9101
| ||||||||||||||||||||
Sbjct 23 GAGTTGTGGCGGCAACCGGAAA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 30730679241024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |