Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq112 250 2e-62
>seq112
Length=7321034
Score = 250 bits (276), Expect = 2e-62
Identities = 153/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 6453081 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTAAGTGTAATAGG 6453022
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|| ||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct 6453021 CTACATCCTGCTGAGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGTCTCAAGATC 6452962
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||| |||||||||||||||||||||| |||||||
Sbjct 6452961 ACCTACTTTGCAGTGATGGATGGAAAGGTGTATGACATCACAG 6452919
Score = 125 bits (138), Expect = 6e-25
Identities = 78/84 (93%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||| || |||||||||||||||||||||||||| | |||
Sbjct 6452827 AGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 6452768
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 6452767 CATCTCATTTGGTTCTCGGATTCC 6452744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40117187722248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |