Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq112 253 2e-63
>seq112
Length=7321034
Score = 253 bits (280), Expect = 2e-63
Identities = 154/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 6453081 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTAAGTGTAATAGG 6453022
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
|| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||
Sbjct 6453021 CTACATCCTGCTGAGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGTCTCAAGATC 6452962
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||| |||||||||||||||||||||| |||||||
Sbjct 6452961 ACCTACTTTGCAGTGATGGATGGAAAGGTGTATGACATCACAG 6452919
Score = 136 bits (150), Expect = 3e-28
Identities = 86/93 (92%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
|||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct 6452827 AGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 6452768
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
|||| |||||||||| ||||| ||||| |||||
Sbjct 6452767 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 6452735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40209984918064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |