Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq763524 118 6e-24 seq761417 118 6e-24 seq539742 118 6e-24 seq489185 118 6e-24 seq471868 118 6e-24 seq395575 118 6e-24 seq411714 107 1e-20 seq499867 102 5e-19 seq214576 82.4 4e-13 seq447138 78.8 5e-12 >seq763524 Length=1256 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 343 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 284 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 283 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 257 >seq761417 Length=1331 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 436 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 377 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 376 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 350 >seq539742 Length=1510 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 1393 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 1452 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 1453 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1479 >seq489185 Length=1918 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 1492 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 1551 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 1552 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1578 >seq471868 Length=1241 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 782 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 723 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 722 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 696 >seq395575 Length=1666 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 1283 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 1342 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 1343 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1369 >seq411714 Length=1073 Score = 107 bits (118), Expect = 1e-20 Identities = 80/89 (90%), Gaps = 5/89 (6%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 356 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 297 Query 897 CC-GACGCGGTCGGGTCGTAGTACGGGCC 924 || | ||||| |||| | || ||||||| Sbjct 296 CCGGCCGCGG-CGGG--GGAG-ACGGGCC 272 >seq499867 Length=1331 Score = 102 bits (112), Expect = 5e-19 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| Sbjct 838 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCT-CACCTCC 780 Query 897 CCGACGCG 904 ||| |||| Sbjct 779 CCGGCGCG 772 >seq214576 Length=1598 Score = 82.4 bits (90), Expect = 4e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||| ||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||| Sbjct 1233 CTGTCCAGGCATAGTTCTCCATCTTTCAGGTTCTAACATGTGCGCTCGTGCTCCACCTCC 1292 Query 897 CCGACGCGGTCGG 909 || || ||| || Sbjct 1293 CCAGCGTGGTGGG 1305 >seq447138 Length=2938 Score = 78.8 bits (86), Expect = 5e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||| |||| |||||||| ||||||||| ||| ||||| |||||||||||||||||||| Sbjct 749 CTGTCCAGCCATAGTTCTCCATCTTTCAGGTTCTAACATGTGCGCTCGTGCTCCACCTCC 808 Query 897 CCGACGCGGTCGG 909 || || ||| || Sbjct 809 CCAGCGTGGTGGG 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2835988640988