Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq7 78.8 5e-11 >seq7 Length=182113224 Score = 78.8 bits (86), Expect = 5e-11 Identities = 112/158 (71%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 7311 CCTGTTTTAGTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCA 7370 ||||| | || |||||||| ||||| |||||||| || | ||||| ||||| || Sbjct 94384900 CCTGTCCTGGTGGAAGATACCTGTCTGTGCTTTAACGCACTTGGGGGACTGCCTGGCCCC 94384841 Query 7371 TACATAAAATGGTTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCA 7430 |||||||||||||| || | | || | ||||||| | | | ||| | | Sbjct 94384840 TACATAAAATGGTTCCTACAGAAGCTGAAGCCTGAAGGTCTCCACCAGCTCCTGGCCGGC 94384781 Query 7431 TTTGGAGATAAATCAGCGTACGCACTATGCACATTCGC 7468 |||| ||| ||||| || || ||||| ||||||||||| Sbjct 94384780 TTTGAAGACAAATCGGCCTATGCACTCTGCACATTCGC 94384743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28908732678632