Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq22039 102 5e-19 seq7888 75.2 6e-11 >seq22039 Length=165401 Score = 102 bits (112), Expect = 5e-19 Identities = 64/69 (93%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 79826 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCTTGCTTCACCTCC 79885 Query 897 CCGACGCGG 905 | | | ||| Sbjct 79886 CGGGCACGG 79894 >seq7888 Length=1401756 Score = 75.2 bits (82), Expect = 6e-11 Identities = 51/56 (91%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897 ||||||||||||||||||||||||||||||| | || |||| ||||||||||||| Sbjct 153155 CAGGCATAGTTCACCATCTTTCGGGTCCTAA-GAGTGTGCTCCTGCTCCACCTCCC 153101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2856227898048