Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_001608.3
Length=19111
Score E
Sequences producing significant alignments: (Bits) Value
seq96522 102 1e-17
>seq96522
Length=1638485
Score = 102 bits (112), Expect = 1e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 923 GAATACGCACCATTTGCACGGGTTCTGAATTTATCAGGGATTAACAACCTCGAACATGGA 982
||||| ||||||||||| ||| | || || || |||||| | || ||| | | |||||||
Sbjct 690095 GAATATGCACCATTTGCTCGGATACTAAACTTGTCAGGGGTAAATAACTTAGGACATGGA 690154
Query 983 CTCTATCCTCAGCTTTCAGCAATTGCGCTGGGTGTGGCAACAGCACACGGCAGTACATTG 1042
| | || ||| | || |||||||| | ||| || ||||||||| || || ||||||
Sbjct 690155 TTATTTCTGCAGTTGTCTGCAATTGCCCAGGGAGTAGCAACAGCATGTGGAAGAACATTG 690214
Query 1043 GCTGGTGTCAATGTTGGCGAACAATATCAACAACTACGAGA 1083
|| ||| ||| | || || || || || |||||| ||||
Sbjct 690215 GCAGGTATCACAGAGGGTGAGCAGTACCAGCAACTATGAGA 690255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 60952553937726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |