Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_004161.1
Length=18891
Score E
Sequences producing significant alignments: (Bits) Value
seq96522 89.7 6e-14
>seq96522
Length=1638485
Score = 89.7 bits (98), Expect = 6e-14
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 1337 GAATATGCCCCTTTTGCTCGCCTTCTCAATCTCTCGGGAGTTAACAACCTAGAACATGGT 1396
|||||||| || |||||||| | || || | || || || || ||| ||| ||||||
Sbjct 690095 GAATATGCACCATTTGCTCGGATACTAAACTTGTCAGGGGTAAATAACTTAGGACATGGA 690154
Query 1397 CTCTACCCACAGTTATCAGCAATTGCTCTTGGAGTTGCCACAGCACATGGTAGCACCCTT 1456
| | | ||||| || |||||||| | ||||| || |||||| ||| || || |
Sbjct 690155 TTATTTCTGCAGTTGTCTGCAATTGCCCAGGGAGTAGCAACAGCATGTGGAAGAACATTG 690214
Query 1457 GCAGGAGTTAATGTTGGTGAGCAGTATCAGCAGCTTAGAGAGGCTGCCACTGAAGCTGA 1515
||||| | | | ||||||||||| ||||| || |||| | || | |||||||||
Sbjct 690215 GCAGGTATCACAGAGGGTGAGCAGTACCAGCAACTATGAGAAGTAGCTAGTGAAGCTGA 690273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 60249525633946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |