Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq80 78.8 5e-12 >seq80 Length=11829778 Score = 78.8 bits (86), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 3/64 (5%) Strand=Plus/Minus Query 837 CTGCCCAGGCAT---AGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACC 893 |||| ||||||| ||||||||||||||||||||||||| | |||||| ||||||||| Sbjct 6327475 CTGCTCAGGCATCATAGTTCACCATCTTTCGGGTCCTAACACGCGCGCTCCTGCTCCACC 6327416 Query 894 TCCC 897 |||| Sbjct 6327415 TCCC 6327412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860589503230