Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_006432.1
Length=18875
Score E
Sequences producing significant alignments: (Bits) Value
seq13 104 3e-18
>seq13
Length=10780687
Score = 104 bits (114), Expect = 3e-18
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 1331 GAATATGCTCCATTTGCACGTCTCCTCAATCTTTCTGGAGTCAACAACTTGGAACATGGG 1390
|| |||||||||||||| | | | | ||||| || ||||| || ||||| |||||||||
Sbjct 8889562 GAGTATGCTCCATTTGCTCATATACGAAATCTGTCAGGAGTAAATAACTTAGAACATGGG 8889621
Query 1391 CTTTATCCACAACTCTCAGCCATTGCTTTGGGTGTTGCAACTGCCCACGGGAGCACGCTG 1450
|| | |||||| | || ||| |||| |||| || |||| || || | | | ||
Sbjct 8889622 CTATTTCCACACTTGTCTGCCGTTGCCCTGGGAGTAACAACAGCACATGATGGAATACTA 8889681
Query 1451 GCTGGTGTTAATGTAGGGGAGCAATATCAGCAACTGCGTGAGGCTGCTACTGAAGCTGAA 1510
|| ||||| | ||| | ||||||||||| ||||| || || || | | ||||| ||||
Sbjct 8889682 GCAGGTGTCACCGTACGAGAGCAATATCAACAACTACGAGAAGCAGTTGGTGAAGTTGAA 8889741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 60260047877474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |