Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_024781.1
Length=19114
Score E
Sequences producing significant alignments: (Bits) Value
seq13 87.8 2e-13
>seq13
Length=10780687
Score = 87.8 bits (96), Expect = 2e-13
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 923 GAGTACGCACCATTTGCACGGGTTTTGAATTTATCAGGGATCAATAACCTTGAGCATGGG 982
||||| || |||||||| | | ||| | ||||| | |||||| | || ||||||
Sbjct 8889562 GAGTATGCTCCATTTGCTCATATACGAAATCTGTCAGGAGTAAATAACTTAGAACATGGG 8889621
Query 983 CTCTATCCTCAGCTTTCAGCAATTGCACTGGGCGTTGCAACAGCACATGGCAGTACATTG 1042
|| | ||| || | || || |||| ||||| || |||||||||||| | | | |
Sbjct 8889622 CTATTTCCACACTTGTCTGCCGTTGCCCTGGGAGTAACAACAGCACATGATGGAATACTA 8889681
Query 1043 GCTGGTGTTAACGTTGGCGAACAATACCAACAACTGCGAGAAGCAG 1088
|| ||||| | ||| | || ||||| |||||||| ||||||||||
Sbjct 8889682 GCAGGTGTCACCGTACGAGAGCAATATCAACAACTACGAGAAGCAG 8889727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 61024574443071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |