Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phodopus_20sungorus_20[genbank_20GCA_5F001707965.1_202016-08-18] 1,462,128 sequences; 2,003,225,912 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq113522 127 1e-26 seq204139 87.8 1e-14 seq939413 78.8 5e-12 >seq113522 Length=235 Score = 127 bits (140), Expect = 1e-26 Identities = 86/91 (95%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 213 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCGTGCGCTCGTGCTCCACCTCC 154 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||||||| |||| || || |||||||||| Sbjct 153 CCGACGCGG-CGGG-CG-AG-ACGGGCCGGT 127 >seq204139 Length=274 Score = 87.8 bits (96), Expect = 1e-14 Identities = 76/91 (84%), Gaps = 10/91 (11%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||| Sbjct 68 CTGCCCAGACATAGTTCACCGTCTTTTGGGTCCTAA------CGCTCGTGCTCCACCTCC 121 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||||||| |||| || || |||||||| Sbjct 122 CCGACGCGG-CGGG-CG--ATATGGGCCGGT 148 >seq939413 Length=1232 Score = 78.8 bits (86), Expect = 5e-12 Identities = 60/69 (87%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 842 CAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGAC 901 ||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct 955 CAGGCATAGG--ACCATCTTTCAGGTCCTAACACATGTGCTCGTGCTCCACCTCCCCGAT 898 Query 902 GCGGTCGGG 910 | ||| ||| Sbjct 897 G-GGTAGGG 890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2817664299744