Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq1083 255 5e-64 >seq1083 Length=1263317 Score = 255 bits (282), Expect = 5e-64 Identities = 155/164 (95%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 832285 TAGGAGGTTTGAAATGGACCGGGAACCTAAAAGTGCCAGATACTGTGCTGAGTGTAATAG 832344 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| || Sbjct 832345 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTAGGCCTCAAGAT 832404 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||| |||||||| |||||||||||||||||||| ||||||| Sbjct 832405 CACCTATTTTGCGCTAATGGATGGAAAGGTGTATGACATCACAG 832448 Score = 127 bits (140), Expect = 2e-25 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||||||||||||||||||||| || |||||||| | || Sbjct 832528 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCATAGAGTCCCCTATC 832587 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| ||||| || Sbjct 832588 ACATCTCATTTGGTTCTCGGATTCC 832612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40111908491844