Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq120 264 9e-67
>seq120
Length=2650420
Score = 264 bits (292), Expect = 9e-67
Identities = 157/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5730 TAGGAGGTTTGAAATGGACCGGGAACCCAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5671
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 5670 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5611
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 5610 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 5567
Score = 120 bits (132), Expect = 2e-23
Identities = 77/84 (92%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||
Sbjct 5486 AGAATGGGCTGGATGCCAGCGTGTGGGGATCTCTCCAGATACCCACAGAGTCCCCTATCA 5427
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 5426 CATCTCATTTGGTTCTCGGATTCC 5403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40081631335956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |