Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq120 269 2e-68
>seq120
Length=2650420
Score = 269 bits (298), Expect = 2e-68
Identities = 158/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5730 TAGGAGGTTTGAAATGGACCGGGAACCCAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5671
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 5670 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5611
Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
|||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 5610 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 5567
Score = 132 bits (146), Expect = 4e-27
Identities = 85/93 (91%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct 5486 AGAATGGGCTGGATGCCAGCGTGTGGGGATCTCTCCAGATACCCACAGAGTCCCCTATCA 5427
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
|||| |||||||||| ||||| ||||| |||||
Sbjct 5426 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 5394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40174346284408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |