Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq236 246 2e-61
>seq236
Length=3250300
Score = 246 bits (272), Expect = 2e-61
Identities = 153/164 (93%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1305800 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAGAG 1305741
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
|||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||
Sbjct 1305740 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTTGGCCTCAAGAT 1305681
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||| ||||| ||||||||||| || |||||||| |||||||
Sbjct 1305680 CACCTATTTTGCACTGATGGATGGGAAAGTGTATGACATCACAG 1305637
Score = 129 bits (142), Expect = 5e-26
Identities = 79/84 (94%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1305556 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 1305497
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
|||||| |||||||| ||||| ||
Sbjct 1305496 CATCTCCTTTGGTTCTCGGATTCC 1305473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40113169513452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |