Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq13052 89.7 3e-15
seq6873 80.6 2e-12
seq5438 77.0 2e-11
>seq13052
Length=681615
Score = 89.7 bits (98), Expect = 3e-15
Identities = 77/90 (86%), Gaps = 4/90 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||| |||||||| | ||||| |||||||| ||||||| | ||||||| ||||||||||||
Sbjct 283964 CTGTCCAGGCATGGATCACCGTCTTTCGGCTCCTAACACGTGCGCTCATGCTCCACCTCC 284023
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGG 926
||| ||||| |||| || || |||||||||
Sbjct 284024 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGG 284049
>seq6873
Length=2177
Score = 80.6 bits (88), Expect = 2e-12
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||| ||||||||| | || | | ||||||||||||
Sbjct 529 CTGCCCAGGCATAGTTCACCATCTTTCAGGTCCTAACACGTGTGACCATGCTCCACCTCC 470
Query 897 CC 898
||
Sbjct 469 CC 468
>seq5438
Length=1959
Score = 77.0 bits (84), Expect = 2e-11
Identities = 62/74 (84%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
|||| |||||||||||||||||||||| ||||||||| | || | | ||||||| ||||
Sbjct 426 CTGCGCAGGCATAGTTCACCATCTTTCAGGTCCTAACACGTGTGACCATGCTCCATCTCC 367
Query 897 CCGACGCGGTCGGG 910
|| ||||| ||||
Sbjct 366 CCAGCGCGG-CGGG 354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2858518905360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |