Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balaenoptera_20bonaerensis_20[genbank_20GCA_5F000978805.1_202015-03-
18] 421,444 sequences; 2,234,641,557 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq357920 414 8e-112
seq335875 414 8e-112
seq181749 414 8e-112
seq392651 271 6e-69
>seq357920
Length=28555
Score = 414 bits (458), Expect = 8e-112
Identities = 257/273 (94%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 75 ATGTGCAGCCAATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTGAGAGT 134
Query 5054 GCCAGATACTGTGCTGAGT-GTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGC 5112
||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||
Sbjct 135 GCCAGATACTGTGCTGAGTAGTAATAGGCTGCATCCTGCTGAGGAAGGAGA-TTTTGGGC 193
Query 5113 AGAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTA 5172
|||||| |||||||||| |||||| ||||||| ||||||||||||||| |||||||||||
Sbjct 194 AGAGTCAAGCATGTTGGACCTCAAGATCACCTGCTTTGCGCTGATGGAAGGAAAGGTGTA 253
Query 5173 TGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGT 5232
||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 254 TGACATCACAGAGTGGGCGGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCGCAGAGT 313
Query 5233 CCCTTGTCACATCTCATTTGGTTCACGGATGCC 5265
||| | |||||||||||||||||||||||| ||
Sbjct 314 CCCCTATCACATCTCATTTGGTTCACGGATACC 346
>seq335875
Length=22866
Score = 414 bits (458), Expect = 8e-112
Identities = 255/272 (94%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 14911 ATGTGTGGCCGATGCCAGGGAAAGCACAGGAGGTTTGAAATGGACCGGGAACCTAGGAGT 14970
Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 14971 GCCAGATACTGTGCTGAGTGTAACAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCC 15030
Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173
||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 15031 GAGTCAAGCATGTTGGGCCTCAAGATCACCTACTTTGCGCTGATGGAGAGAAAGGTGTAT 15090
Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 15091 GACATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCGCAGAGCC 15150
Query 5234 CCTTGTCACATCTCATTTGGTTCACGGATGCC 5265
|| | ||||||||||||||||||||||| |||
Sbjct 15151 CCCTATCACATCTCATTTGGTTCACGGAGGCC 15182
>seq181749
Length=14780
Score = 414 bits (458), Expect = 8e-112
Identities = 257/273 (94%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGC-ATAGGAGGTTTGAAATGGACCGGGAACCTAAGAG 5052
|||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 3173 ATGTGCAGCCAATGCCAGAGAAAGCCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAG 3232
Query 5053 TGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGC 5112
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3233 TGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGAGAATTTTGGGC 3292
Query 5113 AGAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTA 5172
||||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||||
Sbjct 3293 TGAGTCAAGCATGTTGGGCCTCAAGATTACCTACTTT-CGCTGATGGATGGAAAGGTGTA 3351
Query 5173 TGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGT 5232
||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3352 TGACATCATAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCACAGAGT 3411
Query 5233 CCCTTGTCACATCTCATTTGGTTCACGGATGCC 5265
||| | ||||||||||||||||||| |||||||
Sbjct 3412 CCCCTATCACATCTCATTTGGTTCATGGATGCC 3444
>seq392651
Length=12285
Score = 271 bits (300), Expect = 6e-69
Identities = 158/163 (97%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 5464 AGGAGGTTTGAAATGGATCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5523
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 5524 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 5583
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5584 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 5626
Score = 145 bits (160), Expect = 6e-31
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 5703 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 5762
Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265
|||||||||||||||||||||||||
Sbjct 5763 ACATCTCATTTGGTTCACGGATGCC 5787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39928188836592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |