Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelus_20bactrianus_20[refseq_20GCF_5F000767855.1_202014-10-23] 35,455 sequences; 1,992,663,268 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq6382 269 2e-68 >seq6382 Length=783868 Score = 269 bits (298), Expect = 2e-68 Identities = 158/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 695074 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAATGCCAGATACTGTGCTGAGTGTAATAG 695133 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct 695134 GCTGCATCCTGCTGAGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 695193 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 695194 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 695237 Score = 140 bits (154), Expect = 3e-29 Identities = 82/85 (96%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 695317 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 695376 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| |||||||| Sbjct 695377 ACATCTCATTTGGTTCGCGGATGCC 695401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40102398023940