Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq3 271 6e-69
>seq3
Length=88455658
Score = 271 bits (300), Expect = 6e-69
Identities = 158/163 (97%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73521814 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 73521873
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73521874 CTGCACCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 73521933
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||| |||||||||| || ||||||||||||||||
Sbjct 73521934 ACCTACTTTGCAATGATGGATGGGAAAGTGTATGATATCACAG 73521976
Score = 156 bits (172), Expect = 3e-34
Identities = 91/94 (97%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73522056 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 73522115
Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
||||| |||||||||| ||||||||||| |||||
Sbjct 73522116 ACATCTCATTTGGTTCGCGGATGCCAGGCACCAG 73522149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40206007175896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |