Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= NC_030690.1
Length=8930
Score E
Sequences producing significant alignments: (Bits) Value
seq2 80.6 2e-11
>seq2
Length=87689862
Score = 80.6 bits (88), Expect = 2e-11
Identities = 199/293 (68%), Gaps = 13/293 (4%)
Strand=Plus/Minus
Query 463 TTACTGATTGGTGTGGTGATTGGTTCTTCTGCAAAAATC--AAGGCTGGCGCTGAACAGA 520
||| ||||||| | || ||||| || || | ||||||| ||| ||| | ||||| |
Sbjct 35767536 TTAATGATTGGGATAGTAATTGGATCCTCAGAAAAAATCTGAAG--TGGATCAGAACAAA 35767479
Query 521 TTAAAAAGAGATTCAAAACATTAATGGCATCACTCAACAGACCCTCTCATGGAGAAACTG 580
| || |||| ||||| || | |||| |||| |||| | |||||||| || |
Sbjct 35767478 TCAAGTAGAGGTTCAATACTCTCATGGTTACACTGAACAAGCAAGGGCATGGAGACACAG 35767419
Query 581 CCACACTTCTTCAGATGTTTA--ATCCTCATGAAGCTATCGACTGGATTAATGGTCAACC 638
|| | | | | | |||| |||| || ||| | ||| || | ||| |||||
Sbjct 35767418 CCTC--TGCAATAAACCTTTACCATCCCAGTGCTGCTGTTGACCGGCTCAATTCCCAACC 35767361
Query 639 ATGGGTTGG-ATCCTTAGTCTTATCTT-TAATTACTACAGACTTTGAATCACCCGGGAAA 696
||||||||| | || | ||| ||| | || | || | ||||| || | ||||||
Sbjct 35767360 ATGGGTTGGCAGTCTCATAGTTAGCTTGTTAT--CCACCAAGTTTGATTCCCTTGGGAAA 35767303
Query 697 GAATTCATGGATCAGATCAAGCTGGTTGCCAGTTATGCACAAATGACAACATA 749
|| || ||||| ||||||| | ||||||||| | ||| | |||||| |||||
Sbjct 35767302 GAGTTGATGGACCAGATCAGGATGGTTGCCAACTGTGC-CCAATGACTACATA 35767251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28460146824640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |