Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq39437 235 4e-58 >seq39437 Length=85908 Score = 235 bits (260), Expect = 4e-58 Identities = 150/163 (92%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 |||||||||||||||||||| || |||| ||||||||| || |||||||||||||||||| Sbjct 55250 AGGAGGTTTGAAATGGACCGAGAGCCTAGGAGTGCCAGGTATTGTGCTGAGTGTAATAGG 55191 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||| ||| Sbjct 55190 CTGCACCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 55131 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 55130 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 55088 Score = 134 bits (148), Expect = 1e-27 Identities = 80/84 (95%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 55008 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCATATCA 54949 Query 5242 CATCTCATTTGGTTCACGGATGCC 5265 ||||||||||||||| ||||| || Sbjct 54948 CATCTCATTTGGTTCTCGGATCCC 54925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40058130027384