Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eidolon_20helvum_20[genbank_20GCA_5F000465285.1_202013-09-13] 133,538 sequences; 1,837,754,460 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq39437 241 1e-59 >seq39437 Length=85908 Score = 241 bits (266), Expect = 1e-59 Identities = 151/163 (93%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 |||||||||||||||||||| || |||| ||||||||| || |||||||||||||||||| Sbjct 55250 AGGAGGTTTGAAATGGACCGAGAGCCTAGGAGTGCCAGGTATTGTGCTGAGTGTAATAGG 55191 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct 55190 CTGCACCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 55131 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 55130 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 55088 Score = 147 bits (162), Expect = 2e-31 Identities = 101/113 (89%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 55008 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCATATCA 54949 Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279 |||| |||||||||| ||||| ||||| ||||| | | || ||||| | ||| Sbjct 54948 CATCTCATTTGGTTCTCGGATCCCAGGCACCAGTGGGC-GACAGAGGTAGGTG 54897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40150790613712