Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq11 356 2e-94 seq49 259 4e-65 >seq11 Length=31633827 Score = 356 bits (394), Expect = 2e-94 Identities = 242/272 (89%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053 ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61557 ATGTGCAGCTGCTGCCAGGGAAAGCATAGGAGGTTAGAAATGGACCGGGAACCTAAGAGT 61616 Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113 |||||||||||||||||||||||||| ||| ||||||||| ||||| |||||| ||||| Sbjct 61617 GCCAGATACTGTGCTGAGTGTAATAGACTGTGTCCTGCTGAAGAAGGAGACTTTGGGGCA 61676 Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173 |||| || |||||||||||||| | |||||||||||| ||||||||||||||| ||||| Sbjct 61677 GAGTAAAGGATGTTGGGCCTCAAGACCACCTACTTTGCACTGATGGATGGAAAGTTGTAT 61736 Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233 || ||||||||||||||| |||| |||| |||||||||||||||||||| || |||| | Sbjct 61737 GACATCACAGAGTGGGCTCGATGTCAGCAAGTGGGAATCTCCCCAGATACTCATAGAGAC 61796 Query 5234 CCTTGTCACATCTCATTTGGTTCACGGATGCC 5265 || | ||| ||||||||||||| ||||| || Sbjct 61797 CCCTACCACGTCTCATTTGGTTCTCGGATACC 61828 >seq49 Length=11612304 Score = 259 bits (286), Expect = 4e-65 Identities = 155/163 (95%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361650 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 361591 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||| ||||| ||||||||||||||||| || |||| ||||||||| ||| Sbjct 361590 CTGCATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGTATGTGGGGCCTCAAGATC 361531 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 361530 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 361488 Score = 109 bits (120), Expect = 4e-20 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 |||||||||||||||| ||||| || ||||||||||||||||| || | |||||| | || Sbjct 361413 CAGAGTGGGCTGGATGTCAGCGAGTAGGAATCTCCCCAGATACTCATAAAGTCCCCTATC 361354 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| ||||| || Sbjct 361353 ACATCTCATTTGGTTCTCGGATACC 361329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40115335907052